Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHPTPRLAAALLAGSGLGWPLLAQADLVEDSHASLELRNFYFNRDFRQSGARDNADEWAQGFLLRLESGFSEGTVGFGVDAIGLLGFKLDSGSGSGGTGLLPADG------SAGGSQDDYAKLGLTAKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANRIGGR------SDAFDFAGGDYRLTPALTASLHQGRLKDIYRQTFAGLVHTLDLGGQRSLKSDLRFARASEDG--GFR--------------------ELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYPYI-----AGSDPYLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVSGDNVARGAANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVR--SNFANDLDENRLILSYSLALW |
4FRX Chain:A ((7-436)) | ------------------------AGFIEDSKASLTLRNFYINTDNR-----SKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRL---------------GTVFPLESNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQI-GPGVLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKI-KTARGDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSG-----DQDENRLIVSYTLPLL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -15904 for 2725 contacts (-5.8/contact) +
2D Compatibility (PS) -36048 + (NN) 1462 + (LL) 1028
1D Compatibility (HY) -34000 + (ID) 8650
Total energy: -92112.0 ( -33.80 by residue)
QMean score : 0.215
|
|
|