Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLRDP---QLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVT-G-KDEEAVLNECERGEDVAKHRYQAALEK---SLPAEIHQVIERQYQGVLRHHDRVRALRDARA
2BK6 Chain:A ((7-152))
------VDTKEFLNHQVANLNVFTVKIHQIGWYMRGHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLE----NASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYKQGIELTDKEGDDVTNDMLIAFKASIDKHIWMFKAFLGKAP
General information:
TITO was launched using:
RESULT:
Template:
2BK6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7704 for 1018 contacts (-7.6/contact) +
2D Compatibility (PS) -15628 + (NN) -12925 + (LL) 816
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -41191.0 ( -40.46 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_2BK6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BK6-query.scw
PDB file :
Tito_Scwrl_2BK6.pdb
: