Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRTDNVIDFARYRSRRQARRLGEMMWAVYAWRAGYAVPQPPARHDERSRRA
1WAZ Chain:A ((59-68))
--------IYAIQRKRQA----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 401 for 30 contacts (13.4/contact) +
2D Compatibility (PS) -1060 + (NN) -340 + (LL) 3208
1D Compatibility (HY) 0 + (ID) 150
Total energy: 2059.0 ( 68.63 by residue)
QMean score : -0.099
(partial model without unconserved sides chains):
PDB file :
Tito_1WAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WAZ-query.scw
PDB file :
Tito_Scwrl_1WAZ.pdb
: