Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHR-----VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKENPA
4IEP Chain:A ((51-157))
----------------------------------------------------AKFDQYRYTRNLVD-QGNGKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWP---DKKSNEMIKKSERTLRENQCAYINDSIG-LHRVENVSHTEPAVSLHLY------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IEP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19113 for 651 contacts (-29.4/contact) +
2D Compatibility (PS) -11317 + (NN) -10641 + (LL) 6312
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -43309.0 ( -66.53 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_4IEP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IEP-query.scw
PDB file :
Tito_Scwrl_4IEP.pdb
: