Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSKNTICLWYDS-AALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPA--FRHSEAFSFQVATDDQAETDRLWNAIVDNGGE----------ESACGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAMMTMGRIDIATIEKAFKG
1U7I Chain:A ((3-132))
--ARVRPFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGP-GPEGSVLKALFRLGDQSVHCIDSHVRHAFDFTPAFSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1U7I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31108 for 749 contacts (-41.5/contact) +
2D Compatibility (PS) -12339 + (NN) -6096 + (LL) 3632
1D Compatibility (HY) 3200 + (ID) 550
Total energy: -43261.0 ( -57.76 by residue)
QMean score : 0.088
(partial model without unconserved sides chains):
PDB file :
Tito_1U7I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U7I-query.scw
PDB file :
Tito_Scwrl_1U7I.pdb
: