Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKLFATGLAASFLLLPPAQAAPPAPYGVQPHQQAVQRAGEQRQRQLQEQRQRFDEQRLQLQQDQLQRQQQNLQRQRQQRQMQDNLIRQQQLDQQRWR---LEQDQRRLDSERRQLENRRRQSQSPAIR |
3OJA Chain:B ((516-582)) | ------------------------------------------------------ERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12447 for 237 contacts (52.5/contact) +
2D Compatibility (PS) -7815 + (NN) -5506 + (LL) 4904
1D Compatibility (HY) 0 + (ID) 750
Total energy: 3280.0 ( 13.84 by residue)
QMean score : 0.931
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