Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLSEPVRRCPRNGKRIAREPGDRPGTFRLIHPRWAGASVKRAVRACSSCVLLCHAHANPEGTHHVQQHPGARQLHHLPVEATEPGHRRRPARRAAGLFRRFLAHRRGTQRRPRYPAQLRLPLPLSREGTRMIKRIAQTAGFAGLLAALLLTLLQILWVTPLILEAETYEKSEPVAAQPHEHAPGVAAHVHDEEAWEPEDGWQRTLSTTGGNLVVAVGFALMLAGLFTLRAPGQTWQGLLWGLAGYAVFCLAPSLGLPPELPGTAAADLVQRQYWWIATAAATAVGLALLVFGGNWPLKLVGAVLLALPHLFGAPQPEVHASLAPEALAQRFVVASLVSNALFWAALGLAAAWLFRRNRGGVDA |
2LCN Chain:A ((1-15)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GWWLALALAPALALA---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1092 for 50 contacts (-21.8/contact) +
2D Compatibility (PS) -1282 + (NN) 2087 + (LL) 24496
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 22209.0 ( 444.18 by residue)
QMean score : -0.483
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