Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPFRNIGIIGRLGSTQVLDTIRRLKKFLIDRHLHVILEDTIAEVLPGHGLQTCSRKIMGEICDLVVVVGGDGSMLGAARALARHKVPVLGINRGSLGFLTDIRPDELEAKVGEVLDGQYIVESRFLLDAQVRRGIDSMGQGDALNDVVLHPGKSTRMIEFELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHMLSSRPIVVDGNSELKIVVSPNMQIYPQVSCDGQNHFTCAPGDTVTISKKPQKLRLIHPIDHNYYEICRTKLGWGSRLGGGD |
| 1Z0U Chain:A ((67-241)) | ------------------------------------------------------------ENFDFIVSVGGDGTILRILQKLKRCP-PIFGINTGRVGLLTHASPENFEVELKKAVE-------KFEVERFPRVSCSAMPDVLALNEIAVLSRKPAKMIDVALRVDGVEVDRIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECFILIPIAPFRFGWKPYVVSMERKIEVIAEKAI-----VVADGQK----------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Z0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -99735 for 1309 contacts (-76.2/contact) +
2D Compatibility (PS) -19451 + (NN) -7963 + (LL) 7348
1D Compatibility (HY) -15200 + (ID) 3050
Total energy: -138051.0 ( -105.46 by residue)
QMean score : 0.415
|
|
|