Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTN-------NGNTADAAYFRRAYLEFGGTA--YRDWKYQINYDLSRN------VGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEK-ATSSKWVTALERNL-TYDIA---D-WVNDNVGTGIQASSV-VGGMAFLSGSVFSENNNDT------DGDSVKRYNLRGVFAPLHEPGNVVHLGLQYA---YRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSA--QAEYLRRTVKAERD--REDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF |
| 3VY8 Chain:X ((15-355)) | --------------------------------------------------------QVTLYGTIKAGVEVSRVKDAGTYKAQGGKSKTATQIADFGSKIGFKGQEDLGNGMKAIWQLEQKASIAGTNSGWGNRQSFIGL-----K-GGFGTVRAGNLNTVLKDSGDNVNA----W-ESGSNTEDVLGLGTIGRVESREISVRYDSPVFAGFSG-SVQYVPRDNANDVDKYKHTKSSRESYHAGLKYEN-----AGFFGQYAGSFAKYADLNTD----AERVAV--------NTA----------------NAHPVKDYQVHRVVAGYDANDLYVSVAGQYEAAKNNEVGSIKGKKHEQTQVAATAAYRFGN------------------------VTPRVSYAHGFKAKVNG------VKDANYQYDQVIVGADYDFSKRTSALVSAGWLKQGKGA---GKVEQTASMVGLRHKF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 62637 for 2313 contacts (27.1/contact) +
2D Compatibility (PS) -30964 + (NN) 2992 + (LL) 6244
1D Compatibility (HY) 3600 + (ID) 1900
Total energy: 42609.0 ( 18.42 by residue)
QMean score : 0.074
|
|
|