Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAAAAAEVGVVGVQELPHDLALAA
4O6U Chain:A ((2-183))
-SISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSATLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPA----------------------
General information:
TITO was launched using:
RESULT:
Template:
4O6U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117047 for 1488 contacts (-78.7/contact) +
2D Compatibility (PS) -20114 + (NN) -15367 + (LL) 2324
1D Compatibility (HY) -21200 + (ID) 9050
Total energy: -180454.0 ( -121.27 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_4O6U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O6U-query.scw
PDB file :
Tito_Scwrl_4O6U.pdb
: