Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKSFRHLVQALACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKA-RILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHPQQPFDFAEKAY--LLPRDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPTAHGK |
| 2Q2C Chain:A ((46-261)) | ----------------------------------------VGTDAAFAPFEY-MQKGKIVGFDVDLLDAVMKAAGLDYELKNIGWDPLFASLQSKEVDMGISGITITDERKQSYDFSDPYFE--ATQVILVKQGSPVKN--ALDLKGKTIGVQNATTGQEAAEKLFGKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQVIEDPKNFASEYYGMIFPKNSELKAKVDEALKNVINSGKYTEIYKKWF---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94183 for 1748 contacts (-53.9/contact) +
2D Compatibility (PS) -23740 + (NN) -11128 + (LL) 4556
1D Compatibility (HY) -9600 + (ID) 2700
Total energy: -136795.0 ( -78.26 by residue)
QMean score : 0.413
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