Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTATSDLIESLISYSWDDWQVTRQEARRVIAAIRNDNVPDATIAALDKSGSLIKLFQRVGPPELARSLIASIAGRTTMQRYQARNALIRSLINNPLGTQTDNWIYFPTITFFDICADLADAAGRLGFAAAGATGVASQAIQGPFSGVGATGVNPTDLPSIAFGDQLKLLNKDPATVTKYSNPLGDLGAYLSQLSPQDKLNQAQTLVGQPISTLFPDAY------PGNPPSRA--KVMSAAARKYDLTPQLIGAIILAEQRDQTRDEDAKDYQAAVSIKSANTSIGLGQVVVSTAIKYELFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQQDLRKLPKTRGAFPSIDLRAYAGNPRNWPRDNVRALASEYTSRPWDDNLSPGWPMFVDDAYATFLDPGMRFP |
4IQJ Chain:A ((144-279)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCLGAEIPQFILQDRLDLAEARLNEDLS-IFGDRFFIEIQNHGLPEQKKVNQVLKEFARKYGL------GMVATNDGHYVRKEDARAHEVLLAIQSKTT-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5959 for 418 contacts (-14.3/contact) +
2D Compatibility (PS) -9102 + (NN) -4517 + (LL) 19580
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -6548.0 ( -15.67 by residue)
QMean score : 0.374
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