Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSFHIPNMTCGGCAKTVTRILHGVDPQARVETDPPRREARVESTLDKHAFLEALSEAGYPEGR
2XMK Chain:A ((3-61))
-IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGH----
General information:
TITO was launched using:
RESULT:
Template:
2XMK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38280 for 397 contacts (-96.4/contact) +
2D Compatibility (PS) -6198 + (NN) -4518 + (LL) 100
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -53296.0 ( -134.25 by residue)
QMean score : 0.670
(partial model without unconserved sides chains):
PDB file :
Tito_2XMK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XMK-query.scw
PDB file :
Tito_Scwrl_2XMK.pdb
: