Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPLTLIATITAAPG--HAEALERELRALVAPSRAEAGCLQYDLHQDRHDSHLF--------YMIEQWRDDAALERHQNTEHFLRFSRG--NEALLQNVKIDQLYRLA
1R6Y Chain:A ((2-101))
----LTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQ-----
General information:
TITO was launched using:
RESULT:
Template:
1R6Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23878 for 524 contacts (-45.6/contact) +
2D Compatibility (PS) -9799 + (NN) -5110 + (LL) 780
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: -46007.0 ( -87.80 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_1R6Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R6Y-query.scw
PDB file :
Tito_Scwrl_1R6Y.pdb
: