Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILVRPSQTPKGQCWQVCLDQQAVNFRSESEARRFVDRLEARLRAPHVLPELKQRTA
1MKE Chain:A ((111-144))
--------------TFAGDTCQVALNFANEEEAKKFRKAVTDLLGRRQ----------
General information:
TITO was launched using:
RESULT:
Template:
1MKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2769 for 129 contacts (-21.5/contact) +
2D Compatibility (PS) -3690 + (NN) -1231 + (LL) 1664
1D Compatibility (HY) -400 + (ID) 450
Total energy: -6876.0 ( -53.30 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_1MKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MKE-query.scw
PDB file :
Tito_Scwrl_1MKE.pdb
: