Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASHELDYRILGESMQTVEIELDPGETVIAEAGAMNYMTGDIRFTARMGDGSDGSLLGKLWSAGKRKLGGESVFMTHFTNEGQGKQHVAFAAPYPGSVVAVDLDDVGGRLFCQKDSFLCAAYGTRVGIAFTKRLGAGFFGGEGFILQKLEGDGLVFVHAGGTLIRRQLN-GETLRVDTGCLVAFTDGIDYDVQLAGGLKSMLFGGEGLLLTTLKGSGTVWLQSLPFSRLAGRIYDATFRAREEVRTNNG |
2JRA Chain:A ((37-65)) | ---------------------------------------------------------------------------------------------------------------------------------------------------LFTVDREIVIAHGDDRYRLRLTSQNKLIL------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JRA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4202 for 119 contacts (-35.3/contact) +
2D Compatibility (PS) -3198 + (NN) -2274 + (LL) 11832
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -492.0 ( -4.13 by residue)
QMean score : 0.361
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