Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLNTPRNKPSRTETEAVAASSGRSAVGRRDYTEQLRRAARRNAWDLYGEHFY
3KKD Chain:A ((35-56))
----------------------------------QRRQAILDAAMRLIVRD--
General information:
TITO was launched using:
RESULT:
Template:
3KKD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2825 for 61 contacts (46.3/contact) +
2D Compatibility (PS) -1905 + (NN) -1184 + (LL) 1744
1D Compatibility (HY) -800 + (ID) 250
Total energy: 430.0 ( 7.05 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_3KKD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KKD-query.scw
PDB file :
Tito_Scwrl_3KKD.pdb
: