Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTRKLGNSGLEIPALVFGGNV-FGWTADESTSFRLLDALLDAGLNCIDTADVYSRWVPGHQGGESETLIGKWLKRTG-KRDRMVIASKVGMD-MGNGHKGLSAAYIEQALERSLRRLQTDYLDLYQSHTDDPHTDLEETLSTYGELIKKGKVRVIGASNYDARRLLEARQVSARLNLPSYQSLQPEYNLYDRADYETNLEPTVEELGIGVISYYSLASGFLSGKYRNQADTAGRARGEKVKGY-------LNERG---VAILAALDEVAEQYNANPTQVALAWLIARPTVTAPIASATSLEQLDDLIAATHL--KLDEQAIHRLDSASAY |
| 4JTA Chain:A ((6-319)) | ---RNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYA-------AGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRA---SLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JTA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140649 for 2544 contacts (-55.3/contact) +
2D Compatibility (PS) -32912 + (NN) -20725 + (LL) 996
1D Compatibility (HY) -26000 + (ID) 5000
Total energy: -224290.0 ( -88.16 by residue)
QMean score : 0.556
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