Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAYDIEIVNDAAHAGEANHGWCFGLPPGIRPEQWPLDPDTGYPLMHGFTLLLPEDYRVHGPEIVALSFFSLAPDQNDGGPTSVDGIREMLIDPPAQPPAEAELRPFWEAGRNSHPRLHRMEDILGGAYALILLDAAEFSGAPCQPRALPAGNPLLAQTEPPQWLEAGSAASFVPDWAEDDYYLLRALGGRPAAGHQQRYPLRWTARAQDPNAGVVPSEYGDGGYQLPHYWLDGKIERDNYREHPWVEGHLPNHIGGTMRPVQGVPE-MSPFYVEFEEYLGGYNFGGGNAQLDFRDMRFDWACG |
3FDQ Chain:A ((43-62)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEIYHLLTEFYQAVEE-HGGI--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -540 for 63 contacts (-8.6/contact) +
2D Compatibility (PS) -1929 + (NN) 1417 + (LL) 11852
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 8900.0 ( 141.27 by residue)
QMean score : 0.240
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