Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPAETPPLRPDADPPQCALPEARPDRDASTKLRAAVLGANDGLVSNLCLVMGVAGASMAHSSIVLTGMAGLVSGACSMALGEWLSVTNAREMASKRIAEEERLLRL-CPNTETQELIDIFTAKGLSEVSARRVALQLMNDGRGALDTLSREALGIDPTELGGNPWNAAGTSFLLFSLGALVPVAPFLFLDGAAALVASLLSSLLALLFSGAVTARFTGRPLAFSALRQVLVGTLAAAFTYGLGTALGVGLG |
1J3E Chain:A ((80-114)) | -----------------------------------------------------------------------------------------------------WVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCGT------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4486 for 156 contacts (-28.8/contact) +
2D Compatibility (PS) -3403 + (NN) 1959 + (LL) 13388
1D Compatibility (HY) -800 + (ID) 100
Total energy: 6558.0 ( 42.04 by residue)
QMean score : 0.547
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