Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAADRVMQSYGRCCA-STGFFDDFYRHFLASSPQIRAKFATTDMT-------AQKHLLRAGIMNLVMYARGMSDSKLRALGASHS-RAALDIRPELYDLWLDALLMAVAEHD-RDCDAETRDAWRDVMGRGIAVIKSYY
2W72 Chain:C ((5-140))
-ADKTNVKAAWGKVGAHAGEYGAEAYERMFLSFPTTKTYFPHFDLSHGSAQVKGQGKKVADALTNAVAHVDDMP-NALSALSDLHAHK--LRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY
General information:
TITO was launched using:
RESULT:
Template:
2W72.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73031 for 900 contacts (-81.1/contact) +
2D Compatibility (PS) -13448 + (NN) -6409 + (LL) 420
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -100568.0 ( -111.74 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_2W72.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W72-query.scw
PDB file :
Tito_Scwrl_2W72.pdb
: