Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLR-HAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
1WAZ Chain:A ((46-66))
---------VLLPALAIFIGLTIYAIQRKR---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9240 for 70 contacts (-132.0/contact) +
2D Compatibility (PS) -1954 + (NN) -784 + (LL) 3104
1D Compatibility (HY) -2000 + (ID) 150
Total energy: -11024.0 ( -157.49 by residue)
QMean score : -0.285
(partial model without unconserved sides chains):
PDB file :
Tito_1WAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WAZ-query.scw
PDB file :
Tito_Scwrl_1WAZ.pdb
: