Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSRRIPAALSPFQNRVIGACLLGGLLAAGAPAQAEEATGNARWVSDSLTTFVRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQV--RGENGSTVWIPSRDLQEVPGQAERLPQLEQKVAALTAELDGINDTWKTRVQGMQETLDTRKKLIDELQAARSNLDAELGKARSDLRAVQAQLGDENKQVLMRYMVYGGSIAGAGLFAGLILPSLLRVRRKRNDKWF |
2KT8 Chain:A ((9-66)) | ---------------------------------------------VSSSLN--VREGASTSSKVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDIKD----------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1752 for 305 contacts (-5.7/contact) +
2D Compatibility (PS) -6091 + (NN) -4402 + (LL) 12116
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -4129.0 ( -13.54 by residue)
QMean score : 0.631
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