Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLLKLLQDGR--FHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKID------SLWPV-EIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGLAVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMKTAT---DIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEW-ESCNLWQGAQVILSTALSSIEGRVLGVDSRGALRLEVDGVEQGFSGGELSLRLRQ |
4DQ2 Chain:A ((5-303)) | -QDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLE-GCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLV-GNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASNIWNRT-LLFTENDKQFKGQAIDLDYDGYL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136423 for 2179 contacts (-62.6/contact) +
2D Compatibility (PS) -30910 + (NN) -11901 + (LL) 1768
1D Compatibility (HY) -23200 + (ID) 3850
Total energy: -204516.0 ( -93.86 by residue)
QMean score : 0.470
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