Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNL-LKSLAAVSSITMLSR----VLGFVRDTILARIFGAGLATDAFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYKNQQGEEATRTFIAYVSGLLTLVLALVTALGILAAPWVIWVTAPGFADTPEKFALTTDLLRVTFPYILLISLSSLAGAILNTWNRFSVPAFVPTLLNVAMIGFALFLTPYFDPPVMVLGWAVLAGGLLQLLYQLPHLRKIGMLVLPRLNLRDSGVWRVMKLMLPAILGVSVSQISLIINTIFASFLAAGSVSWMYYADRLMELPSGVLGVALGTILLPMLAKTYSNKDRHEYSRLLDWGLRLCFLLVLPCSLALAILAEPLTVSLFQYGKFTTVDAAMTQRALVAYSVG---LLGIILVKVLAPGFYAQQNIRTPVKIALFTLVSTQLMNLAFIGPLQHAGLALSIGLAACLNAGLLYWQLRKQRLY--LPQPGWAKFLVKL--VVAVLAMSAVLLATMHWLPAWEQGAMLERFLRLGLLVVAGLLAYFGMLALLGFRLRDFSRRAVL |
| 3WFS Chain:C ((23-414)) | LNFYLSYFDDVAKVLPREHYCFIVGGWVRDRILGE--PVGYNIDVDFLTTADPVELAKNFAKRIGG--------------------HFFVFEPTIASVVLHL--------PPYRYRFDFSPLKGKDLEKALIEDLKERDFTA------------------------------NAIAVNLDDVLTIVYDPT---GGIKDLEQGLLRPV--------------SIENLKRDPV-RVLRGFRIAIEK------NLQLTEDFYEFVKED--------------PRIVLKSAVERITHELFKIMKEKTAHKVIRELYEYGVLEAIIPEIGRLREVKDPLDEHTLKTLEYLEQVIEDRAKYLSAELLENFGKKRVLGEFTDVELLKWGALFHDIGKPQT-TFYEHDKVGAQIVREIGERLRWGDEATEFVAKLVRHHLRPFFLREAFKKGELKRRGMANFWRECGDIAPHLFLLSIADAMASGDEEEDIKALMETIAELESFNRNEMK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218420 for 2693 contacts (-81.1/contact) +
2D Compatibility (PS) -35399 + (NN) -645 + (LL) 12588
1D Compatibility (HY) 14400 + (ID) 1300
Total energy: -228776.0 ( -84.95 by residue)
QMean score : 0.126
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