Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRGDQAMLKEFVEAGFDLDVQDAKGYTALILAAYHGHGGAVEQLLEAGADPCVQDARGNTALMGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFKREELLQALSARGADLGARDALGNSVESLRRGELNGTAAAR
2QYJ Chain:A ((18-148))
------------------------------------LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKT----------------
General information:
TITO was launched using:
RESULT:
Template:
2QYJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61750 for 1128 contacts (-54.7/contact) +
2D Compatibility (PS) -15176 + (NN) -15815 + (LL) 4708
1D Compatibility (HY) -3600 + (ID) 2250
Total energy: -93883.0 ( -83.23 by residue)
QMean score : 0.759
(partial model without unconserved sides chains):
PDB file :
Tito_2QYJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QYJ-query.scw
PDB file :
Tito_Scwrl_2QYJ.pdb
: