Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQRVYVALGSNLAEPREQIQAALDAFERLPETRLVAVSPLYISDPLGPADQPRFVNGVAALDTNLAPLDLLDALQAIELEQGRVRDL-RWGPRTLDLDILLFGEQLLDLPRLKVPHYHMQARAFVLYPLADLAPDLRLPDGRHLPELLAACPFEGIERLPGA
1EX8 Chain:A ((4-157))
-----YIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNK----
General information:
TITO was launched using:
RESULT:
Template:
1EX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102416 for 1155 contacts (-88.7/contact) +
2D Compatibility (PS) -16048 + (NN) -8411 + (LL) 832
1D Compatibility (HY) -16800 + (ID) 3950
Total energy: -146793.0 ( -127.09 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_1EX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EX8-query.scw
PDB file :
Tito_Scwrl_1EX8.pdb
: