Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRRKTAVPRNAGAVLPMLACLAAQAAEGGFLEDAKTDLVLRNYYFNRDFRDHDAGKSLVDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGVKLNSGRGTSNSELLPLH-DDGRAADNYGRVGVAAKLRVSASELKIGEMLPDIPLLRYDDGRLLPQTFRGFAVVSRELPGLALQAGRFDAVSLRNSADMQDL--------SAWSAPTQKSDGFNYAGAEYRFNRERTQLGLWHGQLEDVYRQSYANLLHKQRVG-DWTLGANLGLFVDRDDGAARAGEIDSHTVYGLFSAGIGLHTFYLGLQKVGGDSGWQSVYGSSGRSMGNDMFNGNFTNADERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATTKAGSG-GKEWERDVELGYTVQSGPLARLNVRLNHASNRRSFNSDFDQTRLVVSYPLSW |
| 4FRT Chain:A ((12-397)) | -----------------------------------GKAGLELRNFYFNRDYRQP--SQSYSEEWAQGFLLRYESGYTEGLFGLGVDALGLLGVRLDSSPERS------YSTSDRRAAHDYSSLGLTAKLRVSHSTLKIGTLMPRLPVVQFNDTRLHPQTFQGGLLEVNEIDGLALQFGQLRQVKQRDSTNAEDLGITRGNKRNV-------SDRFDFAGGTYRWS-ERLSSSYHYANLEDFYRQHHLGVQHLLPLADDQSLKSDIRWARSTDEG--R---VNNRALNALFTYRLGGHAFGLGYQRMSGDSGFAYLAGTDP-YLVNFVQIGDFANKDERSWQLRYDYDFAAIGLPGLTFMSRYLRGEHIDLLDGGGRGKEWERDTDIAYLV--GPLKNLGIKLRNGTFRSDFGNDIDETRLIVSYAL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9299 for 2761 contacts (-3.4/contact) +
2D Compatibility (PS) -36541 + (NN) -4061 + (LL) 4332
1D Compatibility (HY) -29200 + (ID) 7950
Total energy: -82719.0 ( -29.96 by residue)
QMean score : 0.252
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