Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSADKPEQPEHDQEMPLVSHLTELRTRLLRSVAAIFLIFAGLFYFSQKIYTLVSEPLRRFLPEGTSMIATDVASPFLAPFKLTMVVALFLAMPVILAQVWGFIAPGLYKHEKRVALPLLVSSIILFYAGMAFAYFLVFPMIFHFFASVTPEGVAMMTDINSYLDFVLTLFFAFGVAFEIPVATVLLIWIGVVDVDYLKKIRPYVIIGCFVVGMVLTPPDIFSQTMLAVPMWLLFEIGLLFGRLV---RKRGEHPDDQPASDGDQPPATRQ
3VG9 Chain:A ((33-130))--------------------------------------------------------------------------------------------------------------------------------------------------------------LNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFV--LVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKG-------------------


General information:
TITO was launched using:
RESULT:

Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69760 for 483 contacts (-144.4/contact) +
2D Compatibility (PS) -8776 + (NN) 3563 + (LL) 14508
1D Compatibility (HY) -8800 + (ID) 1250
Total energy: -70515.0 ( -145.99 by residue)
QMean score : 0.170

(partial model without unconserved sides chains):
PDB file : Tito_3VG9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VG9-query.scw
PDB file : Tito_Scwrl_3VG9.pdb: