Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEK-GTVGHSFKHW-PKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADD-AYYTIATTTETYHADYIFVATGDYN-FPKKP---F-----KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISF-----DSGQSVHTPHEPILATGFDATKNPIVQQL-FVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 3LZW Chain:A ((5-314)) | TKVYDITIIGGGPVGLFTAFYGGMRQA-SVKIIESLPQLGGQLSALYPEKYIY-----D--VAGFP------------------KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYF-VDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH-------------EHSVENLHAS-KVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEIL-EIDDLIVNYGFVSSLGP-IKNWGLDIEKNSIVVKSTME-TNIEGFFAAGDICTYEGK-VNLIASGFGEAPTAVNNAKAYM------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227725 for 2426 contacts (-93.9/contact) +
2D Compatibility (PS) -31563 + (NN) -13464 + (LL) 4004
1D Compatibility (HY) -11200 + (ID) 2200
Total energy: -282148.0 ( -116.30 by residue)
QMean score : 0.511
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