Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFYDEKKTYQRIEERLEVISSFNAHNEHKNLQDEFKGAGISRRDLLKWAGMMSVTLALPASFAPLTLKAVEVANRLPVIWLHMAECTGCSESLLRSADPTIDSIIFDYINLEYHETIMVASGFQAEKSLHDAIEKHKNNYILMVEGGIP--QGTEYFLTQG-PNAETGAEECRKVAQHAAAIFAIGTCSSFGGVQAAYPNPSNAQPLHKIIDKPVINVPGCPPSEKNIVGNVLYYLMFGTLPKLDAYNRPSWAYGNRIHDLCERRGHFDAGEIVEHFGDENAKKGFCLYKMGCKRPYTFNNCSKLRFNSHTSWPIGAGHGCIGCSEPNFWDTMSPFEEPLANRSIKTAFDGLGADKVADKVGTTLLSATAIGIAAHALLSKAIKNKE |
1YQW Chain:A ((5-262)) | -------------------------------------------------------------------------HRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEG-KDGYYLVVEGGLPTIDGGQWGMVAGHPMIET----TKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEALGVKTINIPGCPPNPINFVGAVVHVLTKG-IPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFN-QVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG----------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -155468 for 2182 contacts (-71.3/contact) +
2D Compatibility (PS) -26851 + (NN) -12617 + (LL) 9472
1D Compatibility (HY) -21600 + (ID) 6650
Total energy: -213714.0 ( -97.94 by residue)
QMean score : 0.395
|
|
|