Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYSKALGTGIGK-VNFHDIEILSDDKGAPLITKEPFNGKSFVSISHSGNYAQASVILEEEK
3HYK Chain:A ((4-120))
MIVGIGIDIIELNRIEKMLD---KFMERILTENERNVAKGLKG-SRLTEFVAGRFAAKEAYSKAVGTGIGKEVSFLDIEVRNDDRGKPILITSTE-HIVHLSISHSKEFAVAQVVLESSS
General information:
TITO was launched using:
RESULT:
Template:
3HYK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38834 for 847 contacts (-45.8/contact) +
2D Compatibility (PS) -12394 + (NN) -7515 + (LL) -80
1D Compatibility (HY) -9600 + (ID) 2850
Total energy: -71273.0 ( -84.15 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_3HYK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HYK-query.scw
PDB file :
Tito_Scwrl_3HYK.pdb
: