Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAMTVPPSLLPLEPFPTAPDTRASTPHIRLHGLGKRYPGG---VQALREIDLEIRRGEVFGIIGRSGAGKSSLIRTLNRLERPSEGQVLIDDEDIGGYDGQRLVALRRRIGMIFQHFNLMSAKTVRQNIALPLRVAGVPRARIEERVAGLLQLVGLEEKRDAYPAQLSGGQKQRVGIARALVHQPQILLCDEATSALDPESTQAILALLRDINRRLGLTIVLITHEMAVIREICDRVVVLECGRIVEQGEVWEVFGDPRHAVTRSLLGS-LRAALPADLQARLRQAPGAGDPVLLDLQYTGASRRVPDLLAIARAIGQRVDLLHGGIERIQGRALGRLLLQVGAPPGELPGVLAKAALVADKVEVLGHVAHA |
| 3TUZ Chain:H ((23-362)) | --------------------------HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246456 for 2626 contacts (-93.9/contact) +
2D Compatibility (PS) -35699 + (NN) -10506 + (LL) 1764
1D Compatibility (HY) -32400 + (ID) 7550
Total energy: -330847.0 ( -125.99 by residue)
QMean score : 0.464
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