Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------MSGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINI-TNNEKVVVKILK---PVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP----ALVFEHVNNTDFKQLYQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID-HEHRKLRLIDWGLAEFYHPGQ-----EYNVRVASRYFKGPELLV---DYQMYDYSLDMWRLGCMLASMIF-RKEPFFHGRDNYDQLVRIAKFLGTEDLYGYIDKYNIELDPRFNDILGRHSRKRWERFV--HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARMGSSSMPGGSTPVSSANVMSGISSVPTPSPLGPLAGSPVIAAANPLGMPVPAATGAQQ-
1LR4 Chain:A ((2-328))SKARVYADVNVLRP----KEYWDYEALTVQWG------E------QDDYEVVRKVGRGKYSEVFEGINVNNN-EKCIIKILKPVK---KKKIKREIKILQNLCGGPNIVKLLDIVRDQ----HSKTPSLIFEYVNNTDFKVLYPT-LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH-ELRKLRLIDWGLAEFY-HPGKEYNV----RVASRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFR-KEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNA--DNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAEN-----------------------------------------------------------S


General information:
TITO was launched using:
RESULT:

Template: 1LR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -209410 for 2272 contacts (-92.2/contact) +
2D Compatibility (PS) -31110 + (NN) -7911 + (LL) 3324
1D Compatibility (HY) -41200 + (ID) 10500
Total energy: -296807.0 ( -130.64 by residue)
QMean score : 0.748

(partial model without unconserved sides chains):
PDB file : Tito_1LR4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LR4-query.scw
PDB file : Tito_Scwrl_1LR4.pdb: