Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEYMSTGSDNKEEIDLLIKHLNVSDVIDIMENLYASEEPAVYEPSLMTMCQDSNQNDERSKSLLLSGQEVPWLSSVRYGTVEDLLAFANHISNTAKHFYGQRPQESGILLNMVITPQNGRYQIDSDVLLIPWKLTYRNIGSDFIPRGAFGKVYLAQDIKTKKRMACKLIPVDQFK--PSDVEIQACF-RHENIAELYGAVLW--GETVHLFMEAGEGGSVLEKLESC--GPMREFEIIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKAV-LVDFGLSVQMTEDVYFPKDLRGTEIYMSPEVILC-----RGHSTKADIYSLGATLIHMQTGTPPWVKRYPRSAYPSYLYIIHKQAPPLEDIADDCSPGMRELIEASLERNPNHRPRAADLLKHEALNPPREDQPRCQSLDSALLERKRLLSRKELELPENIADSSCTGSTEESEMLKRQRSLYIDLGALAGYFNLVRGPPTLEYG |
4OBO Chain:A ((29-311)) | --------------------------------------------------------------------------------------------------------------------------------------------VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---EIKLEINMLKKYSHHRNIATYYGAFIKKSDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFG-----------RNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRA----LFLIPRNPPPRLK-SKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQ----PNERQVRIQLKDHIDRTR------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OBO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97423 for 1959 contacts (-49.7/contact) +
2D Compatibility (PS) -26985 + (NN) -14068 + (LL) 13824
1D Compatibility (HY) -20800 + (ID) 3850
Total energy: -149302.0 ( -76.21 by residue)
QMean score : 0.455
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