Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAPGPAQAAAAESNSREVTEDAADWAPALCPSPEARSPEAPAYRLQDCDALVTMGTGTFGRVHLVKEK-TAKHFFALKVMSIPDVIRRKQEQHVHNEKSVLKEVS-HPFLIRLFWTWHEER-FLYMLMEYVPGGELFSYLR-NRGHFSSTTGLFYSAEIICAIEYLHSKE--IVYRDLKPENILLD-RDGHIKLTDFGFAKKLVDRT---WTLCGTPEYLAPEVIQSK---GHGRAVDWWALGILIFEMLSGFPPFFDDNPFGIYQKILAGKLYFPRHLDFHVKTGRMM--------------------------------------------------------------------------------------------------- |
| 1CDK Chain:A ((8-350)) | --KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H--LDQFERIKTLGT-G--SFGRVMLVKHKETG-NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS--LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRV-K--GRTWTLCGTPEYLAPEIILS-KGY--NKAVDWWALGVLIYEMAAG------------Y-PPFFAD-------QPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCGKEFSEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126130 for 1724 contacts (-73.2/contact) +
2D Compatibility (PS) -24427 + (NN) -4042 + (LL) 1836
1D Compatibility (HY) -22400 + (ID) 5250
Total energy: -180413.0 ( -104.65 by residue)
QMean score : 0.326
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