Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDVIISGGGLLGLITAVGLSNNSVSVAVIEKNNLPRIIDDNRAFAISQGSRKILEKLGIWQFIESEAEP-ILDICILD-ENSPI-TVHYNHKMVS-EEPMGYVINSTVIWNAINNNFLNKLNIYSL--HSYRTITCD-AGYVEVTLGN-N--QKLISSLLICAEGKNSKLPGLFSMSIIKFDYKQSSIVFNVKHELHH----QNLAVEQFFPGGPFAILPMKSGYTSSIVWTEKSEISKMLMNLSEEEFIIELKKRFGSYLGEV---KLDGERKSYPLSFASAKKLYKSRVLLIGDAAHSIHPVAGQGLNLGIRDAESVVRQITAAKAFGIDVGSSYLLKKISRDRCLDNFTMALATDGLNRIFSNRIFCAKTLRNFGLMAVENSKFLKKRFIRHAMGFV |
| 3I3L Chain:A ((22-380)) | TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF--P-RYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQAPWTFSFAAP-APWVFDHAVQVKREEFDKLLLDEARSR-GITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKD-DLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDE--KDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEPDSEFWRKRRITESDDDRLTRKKWFESFRDRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187617 for 2914 contacts (-64.4/contact) +
2D Compatibility (PS) -36284 + (NN) -4869 + (LL) 396
1D Compatibility (HY) -4400 + (ID) 2450
Total energy: -235224.0 ( -80.72 by residue)
QMean score : 0.419
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