Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDKTTKNLLITEINKILPE--DSQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEGSN---KRCEIIKALSQ--AIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATD-KQRRALYNYGVNLGLIFQAKDDIRDYKQDEV--------------NNLMSMLSKSEIENYIDNLFKQALDNLGELS---GDTNYLYNLLNQVKRDD |
1RQJ Chain:A ((9-297)) | ----ACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGI--AGMCGGQALDLDAEGK----------------------------------HVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165570 for 2311 contacts (-71.6/contact) +
2D Compatibility (PS) -28052 + (NN) -11077 + (LL) 2236
1D Compatibility (HY) -14400 + (ID) 4550
Total energy: -221413.0 ( -95.81 by residue)
QMean score : 0.556
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