Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDTQLAQITLTDD-STGAIANPIHLSTAYKHPKLG--------QSTGFDYTRTKNPTRSTFETCFAKLEHGIASFATSSGMSAIQ-LICNLFKPHDEILVSFDLYGGTFRLFEFYEQQYDIKFKYVDFT-DYEQVEKEITDKTVALFIEPISNPQMIAIDVKPYYQLCKAKGLLSIIDNTFLTP-YLSTPLAEGADIVLHSATKYIGGHNDVLAGVVTVKDESLAQQ------L--------------------------FDFHNMTGATLSPIDSYLLLRGLKTLHLRIERAQSNARKLAKKCQSLQAIDEVLYSG-----------------QTGMLSLRLNKA-YSVAKLLENLDICIFAESLGGTETLVTFPYTQTHVDMPDAEKDKRGIDEYLIRLSLGVENYEDIERDIIQALDKAQIGEIV |
| 2CTZ Chain:A ((3-421)) | -FETLQLHAGYEPEPTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHG-AVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGLEHVEDLKAELKEALA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CTZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187798 for 3008 contacts (-62.4/contact) +
2D Compatibility (PS) -38203 + (NN) -15453 + (LL) 992
1D Compatibility (HY) -13200 + (ID) 5350
Total energy: -259012.0 ( -86.11 by residue)
QMean score : 0.510
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