Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNA-FNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGP-QDKPLHDVVIESIDVEE
2A2N Chain:A ((13-175))
-----QAEGP-KRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTP----------------------------WLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV--
General information:
TITO was launched using:
RESULT:
Template:
2A2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59722 for 1273 contacts (-46.9/contact) +
2D Compatibility (PS) -17011 + (NN) -5655 + (LL) 1016
1D Compatibility (HY) -10400 + (ID) 4400
Total energy: -96172.0 ( -75.55 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_2A2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A2N-query.scw
PDB file :
Tito_Scwrl_2A2N.pdb
: