Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFITVTLALGMIATTGATVTSNEVSAAEKDKLPATQKAKEMQNVPYTIAVDGIMAFNQSYLNLPKDSQLSYLDLGNKVKALLYDERGVTPEKIRNAKSAVYTITWKDGSKKEVDLKKD---SYTANLFDSNSIKQIDINVKTK
3R2T Chain:A ((161-249))
-----------------------------------------------------IDDKDGFSIDEFFFIQKEEVSLKELDFKIRKLLIKKYKLYEGS---ADKGRIVINMKDENKYEIDLSDKLDFERMADVINSEQIKNIEVNLK--
General information:
TITO was launched using:
RESULT:
Template:
3R2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12038 for 490 contacts (-24.6/contact) +
2D Compatibility (PS) -8983 + (NN) -924 + (LL) 4832
1D Compatibility (HY) -6800 + (ID) 1100
Total energy: -25013.0 ( -51.05 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_3R2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2T-query.scw
PDB file :
Tito_Scwrl_3R2T.pdb
: