Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNGVGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITETLKNHENITVINEEIN------------------AIPDGYTIIATGPLTTET---------------------LAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSRYDK-GEAAYLNCPMT-EDEFNRFYDAVLEAEVAPV--NSFEKEKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFP-RETMIGSMAYYISHAKN----------------------NKNFQPMNANFGLLPSLE-TRIKDKKERYEAQANRALDYLENFKKTL |
| 3CP8 Chain:A ((20-489)) | HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLS---------AVARMSCNPAIGGV----AKGQITREIDALGGEMGKAIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLIHIGMDHFPGGRSTAEPPVEGLTESLA-SLGFSFGRLKTGTPPRIDSRSVDYTIVTEQPGDVDPVPFSFSSTSVANRNL-VSCYLTKTTEKTHDILRTGFDRSPLFTGCPSIED------KISRF-------------PDKSSHHIFLEPEGTDTVEMYVNGFSTSLPEDIQIAGLRSIPGLEEAKMIRPGYAIEYDFFH-PWQIRSTMETRPVENLFFAGQINGTSGYEEAAAQGLMAGINAVRKILGKELIVLGRDQAYIGVLIDDLITKETKEPYRMFTSSAEHRLILRHDNADLRLRKIGYDCNLVSSDDLHRTESIIKRV------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150886 for 3340 contacts (-45.2/contact) +
2D Compatibility (PS) -40681 + (NN) -12006 + (LL) 2684
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -219989.0 ( -65.86 by residue)
QMean score : 0.454
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