Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------MYQTIIIGGGPSGLMAAVAASEQSSSVLLIEKKKGLGRKLKISGGGRCNV------------TNRLPYAEIIKNIPGNGKFLYSPFSIFDNESIIDFFESRGVKLKEE------DHGRMF---PVSNKAQDVVDTLVTTIERQHVTIKEEEAVSRIEVNTDQTFT------VHTQNNSYESHSLVIATGG------------------TSVPQTGSTGDGYKFAQDLGHTITELFPTEVPITSAEPFIKSNRLKGLSLKDVELSVLKKNGKKRISHQMDMLFTHFGISGPAALRCSQFVYKEQKNQKTQHISMAIDAFPELNHEQLKQHITSLLSDTPDKIIKNSLH-GLIEERYLLFMLEQAGIDENTTSHHLSNQQLNDLVNMFKGFVFKVNGTLPIDKAFVTGGGVSL-KEIQPKTMMSKLVPGLFLCGEVL-DIHGYT--GGYNITSALVTGHVAGLYAGHYSHTSME |
| 1QJD Chain:A ((1-568)) | ADNLAEFHVQNQECDSCHTPDGELSNDSLTYENTQCVSCHGTLAEVAETTKHEHYNAHASHFPGEVACTSCHSAHEKSMVYCDSCHSFDFNMPYAKKWLRDEPTIAELAKDKSERQAALASAPHDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFISTNQPGAVGDGLDVAENAGGALKDMQYIQAHPTLSVK---GGVMVTEAVRGNGAILVNREGKRFVN----------------EITTRDKASAAILAQTGKSAYLIFDDSVRKSLSKIDKYIGLGVAPTADSLVKLGKMEGIDGKALTETVARYNSLVSSGKDTDFERPNLPRALNEGNYYAIEVTPGVHHT-----MGGVMIDTKAEVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89927 for 3636 contacts (-24.7/contact) +
2D Compatibility (PS) -41598 + (NN) -2758 + (LL) 2240
1D Compatibility (HY) -6800 + (ID) 3500
Total energy: -142343.0 ( -39.15 by residue)
QMean score : 0.349
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