Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGH-FAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
1PR6 Chain:B ((3-231))
----TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSK-VNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHI----QTTAAERQTTFNDMIKIALE---
General information:
TITO was launched using:
RESULT:
Template:
1PR6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145004 for 1913 contacts (-75.8/contact) +
2D Compatibility (PS) -23644 + (NN) -5667 + (LL) 1000
1D Compatibility (HY) -25200 + (ID) 6000
Total energy: -204515.0 ( -106.91 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_1PR6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PR6-query.scw
PDB file :
Tito_Scwrl_1PR6.pdb
: