Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRQLGNAGLVTSELGFGCMGLNYHRGPAKDRNEMIEVVRTAMDAGITMFDTAEVYGPYTNEELVGEALVGKRNHVQIATKGGFKINGLNNEVDSRPESIKAAVEGSLKRLKTDYIDLYYIHRIDPSIPIEEVAGTIQNLKQEGKILHWGLSEASAKTIRRAHKVEPLAAVESEYSIWWREAEKEVFPVLEELGIGLVAYSPLGRGYLTGKLDINADFNANDNRGGLPRFQKEAMEANQVLLDFMKEIADEQ--NVTTAQLALAWILDQKPWIVPIPGTTRPSRIEENIASTE-IHFDDGARQKIADALSQIEIVGDRYSAAENKRIGK
1YNP Chain:A ((21-311))MKKRQLGTSDLHVSELGFGCMSLG------TDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKGRRQDIILATKV-------------SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYSILDRRPE-EWFPLIQEHGVSVVVRGPVARGLLSRRPLPEGEGY------------------LNYRYDELKLLRESLPTDRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQKLAKAAV----------------


General information:
TITO was launched using:
RESULT:

Template: 1YNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134190 for 2277 contacts (-58.9/contact) +
2D Compatibility (PS) -28954 + (NN) -9805 + (LL) 2020
1D Compatibility (HY) -16000 + (ID) 4550
Total energy: -191479.0 ( -84.09 by residue)
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_1YNP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YNP-query.scw
PDB file : Tito_Scwrl_1YNP.pdb: