Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
1W55 Chain:A ((210-365))
-IFTGNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMAVLSSVNLKY
General information:
TITO was launched using:
RESULT:
Template:
1W55.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108021 for 1289 contacts (-83.8/contact) +
2D Compatibility (PS) -17153 + (NN) -10837 + (LL) 208
1D Compatibility (HY) -11600 + (ID) 3900
Total energy: -151303.0 ( -117.38 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_1W55.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W55-query.scw
PDB file :
Tito_Scwrl_1W55.pdb
: