Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALCYGVLNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGF-FAKEELADFSAFGSRIIGHPNNKVAGIEMNTGSLGHGLSVSVGMALAAKMDG----------KSYHTYTLMGDGELAEGSVWEGAMAAANYKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVIEA-DGN-NPDKLQAIFKTVNE-TGKPRLIIAKTIKGYGVKMAENVAKWHHYVPSSEEYEIAMKDLEERMEACRHE |
| 1GPU Chain:A ((6-278)) | -DIDKLAVSTIRILAVDTVSKANSGHPGAPLGMAPAAHVLWS-QMRMNPTNPDWINRDRFVLSNGHAVALLYSMLHLTGYDLSIEDLKQFRQLGSRTPGHPEFELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATSISF-DEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKLSKDKPTLIKMTTTIGYGSLHA-GSHSVHGAPLKADDVKQLKSK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94310 for 2315 contacts (-40.7/contact) +
2D Compatibility (PS) -28171 + (NN) -13090 + (LL) 1356
1D Compatibility (HY) -10400 + (ID) 4400
Total energy: -149015.0 ( -64.37 by residue)
QMean score : 0.481
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