Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTGMNGRIVIADDEPITRMDIRDILEEANYNVVGEATDGFEAIELCKSHQPDLVIMDIQMPLLDGLKAGKRIISEGLAGGIILLTAFSDPKNTEKAKGFGALGYLVKPLDEKSLIPTVEMSIAKGRETRKLEQQLEKLTKKLEERKVIEKAKGVLMIENNITEEEAYNMIRNLSMDKRCPMMEIAETIVMSDD
1KGS Chain:A ((3-124))
-----VRVLVVEDERDLADLITEALKKEMFTV-DVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIR----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1KGS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68904 for 927 contacts (-74.3/contact) +
2D Compatibility (PS) -12700 + (NN) -5975 + (LL) 6760
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -91419.0 ( -98.62 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_1KGS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KGS-query.scw
PDB file :
Tito_Scwrl_1KGS.pdb
: