Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTVKLNNGVEVPILGFGTYQITDA--AEAEHAVKDAIKAGYRHIDTAQSYMNEEAVGRGIAAS----GVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVDLLLIHQPFN---------------------DVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFN--EVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGKND---------IFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIAGLDQGESQFFSHADPEMVKWMASRKLNV |
| 1S1P Chain:A ((6-308)) | -QCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRN-LHYFNS---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1S1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142834 for 2262 contacts (-63.1/contact) +
2D Compatibility (PS) -28925 + (NN) -13557 + (LL) 1740
1D Compatibility (HY) -24000 + (ID) 4700
Total energy: -212276.0 ( -93.84 by residue)
QMean score : 0.575
|
|
|