Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKPFIAGNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK
1O5X Chain:A ((3-247))
--RKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLL-QSKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKE-SFVDIIKSAM
General information:
TITO was launched using:
RESULT:
Template:
1O5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113297 for 2053 contacts (-55.2/contact) +
2D Compatibility (PS) -27165 + (NN) -13963 + (LL) 556
1D Compatibility (HY) -18400 + (ID) 4350
Total energy: -176619.0 ( -86.03 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_1O5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5X-query.scw
PDB file :
Tito_Scwrl_1O5X.pdb
: